MicrobesOnline Operon Predictions for Candidatus Phytoplasma mali

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column Description
Gene1 VIMSS id of 1st gene in pair
SysName1 Systematic name of 1st gene in pair
Name1 Ordinary name of 1st gene in pair
Gene2 VIMSS id of 2nd gene in pair
SysName2 Systematic name of 2nd gene in pair
Name2 Ordinary name of 2nd gene in pair
bOp Whether the pair is predicted to lie in the same operon or not
pOp Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep Distance between the two genes, in base pairs
MOGScore Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim Whether the genes share a COG category or not
ExprSim Correlation of expression patterns (not available for most genomes)

 Gene1 Gene2 SysName1 SysName2 Name1 Name2 bOp pOp Sep MOGScore GOScore COGSim ExprSim
 5420695 5420696 ATP_00002 ATP_00003   znuB TRUE 0.082 173.000 0.000 NA   NA
 5420696 5420697 ATP_00003 ATP_00004 znuB znuB TRUE 0.999 7.000 0.443 0.019 Y NA
 5420697 5420698 ATP_00004 ATP_00005 znuB znuC TRUE 1.000 2.000 0.432 1.000 Y NA
 5420698 5420699 ATP_00005 ATP_00006 znuC znuA TRUE 0.994 55.000 0.898 1.000 Y NA
 5420699 5420700 ATP_00006 ATP_00007 znuA   FALSE 0.041 1593.000 0.000 NA   NA
 5420700 5420701 ATP_00007 ATP_00008     TRUE 0.312 105.000 0.000 NA   NA
 5420701 5420702 ATP_00008 ATP_00009     FALSE 0.038 1028.000 0.000 NA   NA
 5420702 5420703 ATP_00009 ATP_00010     FALSE 0.030 492.000 0.000 NA   NA
 5420703 5420704 ATP_00010 ATP_00011   hflB FALSE 0.046 220.000 0.000 NA   NA
 5420706 5420707 ATP_00013 ATP_00014 phnL   FALSE 0.030 484.000 0.000 NA   NA
 5420707 5420708 ATP_00014 ATP_00015     FALSE 0.034 295.000 0.000 NA   NA
 5420708 5420709 ATP_00015 ATP_00016     TRUE 0.333 101.000 0.000 NA   NA
 5420709 5420710 ATP_00016 ATP_00017     FALSE 0.032 370.000 0.000 NA   NA
 5420710 5420711 ATP_00017 ATP_00018     FALSE 0.036 272.000 0.000 NA   NA
 5420711 5420712 ATP_00018 ATP_00019   mleP FALSE 0.034 742.000 0.000 NA   NA
 5420712 5420713 ATP_00019 ATP_00020 mleP   FALSE 0.030 440.000 0.000 NA   NA
 5420713 5420714 ATP_00020 ATP_00021     FALSE 0.032 622.000 0.000 NA   NA
 5420714 5420715 ATP_00021 ATP_00022     TRUE 0.213 116.000 0.000 NA   NA
 5420715 5420716 ATP_00022 ATP_00023     FALSE 0.031 422.000 0.000 NA   NA
 5420716 5420717 ATP_00023 ATP_00024     FALSE 0.036 272.000 0.000 NA   NA
 5420717 5420718 ATP_00024 ATP_00025     TRUE 0.121 148.000 0.000 NA   NA
 5420718 5420719 ATP_00025 ATP_00026     FALSE 0.031 534.000 0.000 NA   NA
 5420719 5420720 ATP_00026 ATP_00027   nfo FALSE 0.055 181.000 0.000 1.000 N NA
 5420720 5420721 ATP_00027 ATP_00028 nfo srmB TRUE 1.000 -7.000 0.104 1.000 Y NA
 5420721 5420722 ATP_00028 ATP_00029 srmB nusB TRUE 0.098 112.000 0.000 1.000   NA
 5420722 5420723 ATP_00029 ATP_00030 nusB sodA TRUE 0.985 51.000 0.055 1.000   NA
 5420727 5420728 ATP_00034 ATP_00035 hflB   TRUE 0.402 53.000 0.000 1.000   NA
 5420728 5420729 ATP_00035 ATP_00036     TRUE 0.101 156.000 0.000 NA   NA
 5420729 5420730 ATP_00036 ATP_00037     FALSE 0.031 546.000 0.000 NA   NA
 5420730 5420731 ATP_00037 ATP_00038     TRUE 0.628 59.000 0.000 NA   NA
 5420731 5420732 ATP_00038 ATP_00039   hflB TRUE 0.395 91.000 0.000 NA   NA
 5420732 5420733 ATP_00039 ATP_00040 hflB   TRUE 0.862 25.000 0.000 NA   NA
 5420733 5420734 ATP_00040 ATP_00041     TRUE 0.719 49.000 0.000 NA   NA
 5420734 5420735 ATP_00041 ATP_00042   pepP FALSE 0.032 605.000 0.000 NA   NA
 5420736 5420737 ATP_00043 ATP_00044 dnaX   TRUE 0.998 19.000 0.100 NA   NA
 5420737 5420738 ATP_00044 ATP_00045   recR TRUE 0.999 3.000 0.604 NA   NA
 5420738 5420739 ATP_00045 ATP_00046 recR rpoE TRUE 0.993 -3.000 0.002 1.000   NA
 5420739 5420740 ATP_00046 ATP_00047 rpoE pssA TRUE 0.756 132.000 0.022 1.000   NA
 5420740 5420741 ATP_00047 ATP_00048 pssA psd TRUE 0.999 13.000 0.130 0.012 Y NA
 5420741 5420742 ATP_00048 ATP_00049 psd pyrG TRUE 0.996 -3.000 0.004 1.000 N NA
 5420743 5420744 ATP_00050 ATP_00051   dnaD TRUE 0.113 151.000 0.000 NA   NA
 5420744 5420745 ATP_00051 ATP_00052 dnaD rnc TRUE 0.999 -7.000 0.005 NA N NA
 5420745 5420746 ATP_00052 ATP_00053 rnc plsX TRUE 0.999 -19.000 0.029 1.000 N NA
 5420746 5420747 ATP_00053 ATP_00054 plsX recG TRUE 0.903 74.000 0.003 1.000 N NA
 5420748 5420749 ATP_00055 ATP_00056     FALSE 0.032 620.000 0.000 NA   NA
 5420750 5420751 ATP_00057 ATP_00058     TRUE 0.434 82.000 0.000 NA   NA
 5420751 5420752 ATP_00058 ATP_00059   rep TRUE 0.232 113.000 0.000 NA   NA
 5420752 5420753 ATP_00059 ATP_00060 rep   FALSE 0.034 295.000 0.000 NA   NA
 5420753 5420754 ATP_00060 ATP_00061     FALSE 0.048 219.000 0.000 NA   NA
 5420754 5420755 ATP_00061 ATP_00062     FALSE 0.044 225.000 0.000 NA   NA
 5420755 5420756 ATP_00062 ATP_00063     FALSE 0.035 796.000 0.000 NA   NA
 5420756 5420757 ATP_00063 ATP_00064   dppD TRUE 0.507 42.000 0.000 1.000   NA
 5420757 5420758 ATP_00064 ATP_00065 dppD dppF TRUE 0.999 18.000 0.109 0.006 Y NA
 5420758 5420759 ATP_00065 ATP_00066 dppF dppC TRUE 0.975 17.000 0.000 1.000 Y NA
 5420759 5420760 ATP_00066 ATP_00067 dppC dppB TRUE 0.999 21.000 0.095 0.040 Y NA
 5420760 5420761 ATP_00067 ATP_00068 dppB dppA TRUE 0.332 117.000 0.000 0.040 Y NA
 5420761 5420762 ATP_00068 ATP_00069 dppA dnaC FALSE 0.024 369.000 0.000 1.000 N NA
 5420762 5420763 ATP_00069 ATP_00070 dnaC dnaB2 TRUE 1.000 4.000 0.817 NA Y NA
 5420763 5420764 ATP_00070 ATP_00071 dnaB2 nei TRUE 0.999 16.000 0.012 NA Y NA
 5420764 5420765 ATP_00071 ATP_00072 nei polA TRUE 0.992 53.000 0.010 1.000 Y NA
 5420765 5420766 ATP_00072 ATP_00073 polA ffh TRUE 0.732 37.000 0.000 1.000 N NA
 5420766 5420767 ATP_00073 ATP_00074 ffh ftsY TRUE 0.993 48.000 0.024 0.006 Y NA
 5420767 5420768 ATP_00074 ATP_00075 ftsY topA TRUE 0.668 47.000 0.000 1.000 N NA
 5420768 5420769 ATP_00075 ATP_00076 topA   TRUE 0.969 40.000 0.004 1.000   NA
 5420769 5420770 ATP_00076 ATP_00077     TRUE 0.982 48.000 0.007 NA   NA
 5420770 5420771 ATP_00077 ATP_00078   engC FALSE 0.033 324.000 0.000 NA   NA
 5420771 5420772 ATP_00078 ATP_00079 engC pheT TRUE 0.268 70.000 0.000 1.000   NA
 5420772 5420773 ATP_00079 ATP_00080 pheT pheS TRUE 0.998 29.000 0.574 0.006 Y NA
 5420773 5420774 ATP_00080 ATP_00081 pheS polC1 TRUE 0.166 92.000 0.000 1.000   NA
 5420774 5420775 ATP_00081 ATP_R0034 polC1 tRNA-Leu TRUE 0.165 125.000 0.000 NA   NA
 5420775 5420776 ATP_R0034 ATP_00082 tRNA-Leu   TRUE 0.165 125.000 0.000 NA   NA
 5420776 5420777 ATP_00082 ATP_00083   rfaG FALSE 0.034 757.000 0.000 NA   NA
 5420778 5420779 ATP_00084 ATP_00085   pgpB TRUE 0.369 95.000 0.000 NA   NA
 5420782 5420783 ATP_00088 ATP_00089     TRUE 0.312 105.000 0.000 NA   NA
 5420783 5420784 ATP_00089 ATP_00090     TRUE 0.086 169.000 0.000 NA   NA
 5420784 5420785 ATP_00090 ATP_00091     FALSE 0.035 279.000 0.000 NA   NA
 5420785 5420786 ATP_00091 ATP_00092   trpS FALSE 0.031 549.000 0.000 NA   NA
 5420786 5420787 ATP_00092 ATP_00093 trpS   FALSE 0.023 182.000 0.000 1.000   NA
 5420788 5420789 ATP_00094 ATP_00095 degV degV FALSE 0.046 220.000 0.000 NA   NA
 5420789 5420790 ATP_00095 ATP_00096 degV lysU TRUE 0.657 56.000 0.000 NA   NA
 5420790 5420791 ATP_00096 ATP_00097 lysU dnaE TRUE 0.963 45.000 0.004 0.084 N NA
 5420791 5420792 ATP_00097 ATP_00098 dnaE   TRUE 0.788 37.000 0.000 NA   NA
 5420793 5420794 ATP_00099 ATP_00100 prfB secA TRUE 0.953 97.000 0.052 1.000 N NA
 5420794 5420795 ATP_00100 ATP_00101 secA phnL TRUE 0.165 93.000 0.000 0.082 N NA
 5420795 5420796 ATP_00101 ATP_00102 phnL   FALSE 0.016 214.000 0.000 1.000   NA
 5420798 5420799 ATP_00104 ATP_00105 mleP pfkA FALSE 0.047 187.000 0.000 1.000 N NA
 5420799 5420800 ATP_00105 ATP_00106 pfkA cof TRUE 0.737 20.000 0.000 1.000   NA
 5420800 5420801 ATP_00106 ATP_00107 cof norM FALSE 0.058 55.000 0.000 0.081   NA
 5420801 5420802 ATP_00107 ATP_00108 norM mutT TRUE 0.476 67.000 0.000 1.000 N NA
 5420802 5420803 ATP_00108 ATP_00109 mutT fba FALSE 0.039 206.000 0.000 1.000 N NA
 5420803 5420804 ATP_00109 ATP_00110 fba evbH TRUE 0.476 67.000 0.000 1.000 N NA
 5420804 5420805 ATP_00110 ATP_00111 evbH evbG TRUE 0.999 1.000 0.846 0.016 Y NA
 5420805 5420806 ATP_00111 ATP_00112 evbG iscU FALSE 0.041 196.000 0.000 1.000 N NA
 5420806 5420807 ATP_00112 ATP_00113 iscU csdB TRUE 0.999 -16.000 0.053 1.000 N NA
 5420807 5420808 ATP_00113 ATP_00114 csdB tyrS TRUE 0.929 84.000 0.008 1.000 N NA
 5420808 5420809 ATP_00114 ATP_00115 tyrS srmB TRUE 0.104 308.000 0.000 1.000 Y NA
 5420809 5420810 ATP_00115 ATP_00116 srmB eda FALSE 0.032 1761.000 0.000 1.000 N NA
 5420810 5420811 ATP_00116 ATP_R0028 eda tRNA-Cys FALSE 0.035 283.000 0.000 NA   NA
 5420811 5420812 ATP_R0028 ATP_00117 tRNA-Cys   FALSE 0.031 378.000 0.000 NA   NA
 5420812 5420813 ATP_00117 ATP_00118     TRUE 0.987 70.000 0.600 NA   NA
 5420813 5420814 ATP_00118 ATP_00119     TRUE 0.840 151.000 0.037 NA   NA
 5420814 5420815 ATP_00119 ATP_00120   gpsA TRUE 0.901 109.000 0.014 1.000 N NA
 5420815 5420816 ATP_00120 ATP_00121 gpsA   TRUE 0.999 -3.000 0.068 1.000   NA
 5420816 5420817 ATP_00121 ATP_00122   cmk TRUE 0.999 -10.000 0.060 1.000   NA
 5420817 5420818 ATP_00122 ATP_00123 cmk rsuA TRUE 0.995 29.000 0.042 1.000 N NA
 5420818 5420819 ATP_00123 ATP_00124 rsuA efp TRUE 0.985 47.000 0.002 1.000 Y NA
 5420819 5420820 ATP_00124 ATP_00125 efp miaA TRUE 0.999 -7.000 0.004 1.000 Y NA
 5420820 5420821 ATP_00125 ATP_00126 miaA   TRUE 0.992 26.000 0.008 NA   NA
 5420821 5420822 ATP_00126 ATP_00127     TRUE 0.992 57.000 0.245 NA   NA
 5420822 5420823 ATP_00127 ATP_00128     FALSE 0.039 252.000 0.000 NA   NA
 5420824 5420825 ATP_00129 ATP_00130   rnhC TRUE 0.255 112.000 0.000 NA   NA
 5420825 5420826 ATP_00130 ATP_00131 rnhC hit TRUE 0.987 45.000 0.017 1.000 N NA
 5420827 5420828 ATP_00132 ATP_00133 serS rpsT TRUE 0.888 51.000 0.000 1.000 Y NA
 5420829 5420830 ATP_00134 ATP_00135 pgsA recA TRUE 0.977 63.000 0.022 1.000 N NA
 5420831 5420832 ATP_00136 ATP_00137   gidA FALSE 0.040 1247.000 0.000 NA   NA
 5420832 5420833 ATP_00137 ATP_00138 gidA   TRUE 0.989 28.000 0.004 NA   NA
 5420833 5420834 ATP_00138 ATP_00139     TRUE 0.088 165.000 0.000 NA   NA
 5420834 5420835 ATP_00139 ATP_00140   tdk TRUE 0.998 21.000 0.009 1.000 Y NA
 5420835 5420836 ATP_00140 ATP_00141 tdk rpmE TRUE 0.989 51.000 0.052 1.000 N NA
 5420836 5420837 ATP_00141 ATP_00142 rpmE glyA TRUE 0.074 159.000 0.000 1.000 N NA
 5420837 5420838 ATP_00142 ATP_00143 glyA   TRUE 0.061 189.000 0.000 NA   NA
 5420840 5420841 ATP_00145 ATP_00146   hflB TRUE 0.816 33.000 0.000 NA   NA
 5420841 5420842 ATP_00146 ATP_00147 hflB   TRUE 0.613 62.000 0.000 NA   NA
 5420842 5420843 ATP_00147 ATP_00148     TRUE 0.753 44.000 0.000 NA   NA
 5420844 5420845 ATP_00149 ATP_00150     TRUE 0.962 -3.000 0.000 NA   NA
 5420846 5420847 ATP_00151 ATP_00152 mleP tatD FALSE 0.053 585.000 0.000 NA N NA
 5420847 5420848 ATP_00152 ATP_00153 tatD lpd TRUE 0.069 233.000 0.000 NA N NA
 5420848 5420849 ATP_00153 ATP_00154 lpd aceF TRUE 0.998 30.000 0.857 1.000 Y NA
 5420849 5420850 ATP_00154 ATP_00155 aceF acoB TRUE 0.997 37.000 0.069 0.036 Y NA
 5420850 5420851 ATP_00155 ATP_00156 acoB acoA TRUE 1.000 0.000 0.458 0.005 Y NA
 5420852 5420853 ATP_00157 ATP_00158 metN asnS FALSE 0.024 709.000 0.000 1.000 N NA
 5420853 5420854 ATP_00158 ATP_00159 asnS malK TRUE 0.373 80.000 0.000 1.000 N NA
 5420854 5420855 ATP_00159 ATP_00160 malK malF TRUE 1.000 3.000 0.611 0.036 Y NA
 5420855 5420856 ATP_00160 ATP_00161 malF malG TRUE 0.999 19.000 0.296 0.036 Y NA
 5420856 5420857 ATP_00161 ATP_00162 malG malE TRUE 0.996 83.000 0.353 NA Y NA
 5420857 5420858 ATP_00162 ATP_00163 malE   FALSE 0.033 721.000 0.000 NA   NA
 5420858 5420859 ATP_00163 ATP_00164   thdF TRUE 0.901 77.000 0.005 1.000   NA
 5420859 5420860 ATP_00164 ATP_00165 thdF thrS TRUE 0.500 43.000 0.000 1.000   NA
 5420860 5420861 ATP_00165 ATP_00166 thrS tpiA TRUE 0.138 122.000 0.000 1.000 N NA
 5420862 5420863 ATP_00167 ATP_00168 ruvB ruvA TRUE 0.999 19.000 0.549 0.034 Y NA
 5420864 5420865 ATP_00169 ATP_00170   hsdS FALSE 0.036 811.000 0.000 NA   NA
 5420866 5420867 ATP_00171 ATP_00172   intQ TRUE 0.899 20.000 0.000 NA   NA
 5420867 5420868 ATP_00172 ATP_00173 intQ   FALSE 0.053 204.000 0.000 NA   NA
 5420868 5420869 ATP_00173 ATP_00174   sua5 TRUE 0.108 154.000 0.000 NA   NA
 5420869 5420870 ATP_00174 ATP_00175 sua5 prfA TRUE 0.985 72.000 0.004 NA Y NA
 5420870 5420871 ATP_00175 ATP_00176 prfA dnaB1 TRUE 0.527 63.000 0.000 1.000 N NA
 5420871 5420872 ATP_00176 ATP_00177 dnaB1 rplI TRUE 0.998 3.000 0.012 1.000 N NA
 5420872 5420873 ATP_00177 ATP_00178 rplI rpsR TRUE 0.938 77.000 0.016 0.092 N NA
 5420873 5420874 ATP_00178 ATP_00179 rpsR ssb TRUE 0.985 23.000 0.003 1.000 N NA
 5420874 5420875 ATP_00179 ATP_00180 ssb rpsF TRUE 0.993 8.000 0.003 1.000 N NA
 5420875 5420876 ATP_00180 ATP_R0035 rpsF tRNA-Trp FALSE 0.032 349.000 0.000 NA   NA
 5420876 5420877 ATP_R0035 ATP_R0036 tRNA-Trp tRNA-Leu TRUE 0.745 45.000 0.000 NA   NA
 5420877 5420878 ATP_R0036 ATP_R0037 tRNA-Leu tRNA-Gln TRUE 0.753 44.000 0.000 NA   NA
 5420878 5420879 ATP_R0037 ATP_R0030 tRNA-Gln tRNA-His TRUE 0.811 34.000 0.000 NA   NA
 5420879 5420880 ATP_R0030 ATP_00181 tRNA-His spoT FALSE 0.048 219.000 0.000 NA   NA
 5420880 5420881 ATP_00181 ATP_00182 spoT trmU TRUE 0.963 62.000 0.006 1.000 N NA
 5420881 5420882 ATP_00182 ATP_00183 trmU qns TRUE 0.992 15.000 0.005 1.000   NA
 5420883 5420884 ATP_00184 ATP_00185 groES groEL TRUE 0.900 178.000 0.050 1.000 Y NA
 5420885 5420886 ATP_00186 ATP_00187 nrdF nrdA TRUE 0.997 40.000 0.250 0.005 Y NA
 5420886 5420887 ATP_00187 ATP_00188 nrdA   FALSE 0.031 403.000 0.000 NA   NA
 5420887 5420888 ATP_00188 ATP_00189     FALSE 0.042 1754.000 0.000 NA   NA
 5420888 5420889 ATP_00189 ATP_00190     TRUE 0.868 24.000 0.000 NA   NA
 5420889 5420890 ATP_00190 ATP_00191     FALSE 0.037 1001.000 0.000 NA   NA
 5420890 5420891 ATP_00191 ATP_00192     TRUE 1.000 14.000 1.000 NA Y NA
 5420892 5420893 ATP_00193 ATP_00194 dnaA dnaN TRUE 0.999 2.000 0.005 1.000 Y NA
 5420893 5420894 ATP_00194 ATP_00195 dnaN gyrB TRUE 0.290 154.000 0.000 1.000 Y NA
 5420894 5420895 ATP_00195 ATP_00196 gyrB gyrA TRUE 0.997 46.000 0.306 0.005 Y NA
 5420895 5420896 ATP_00196 ATP_00197 gyrA   TRUE 0.117 150.000 0.000 NA   NA
 5420896 5420897 ATP_00197 ATP_00198     TRUE 0.702 51.000 0.000 NA   NA
 5420897 5420898 ATP_00198 ATP_00199     TRUE 0.410 52.000 0.000 1.000   NA
 5420898 5420899 ATP_00199 ATP_00200     TRUE 0.997 19.000 0.012 0.005 Y NA
 5420899 5420900 ATP_00200 ATP_00201   glnS TRUE 0.885 18.000 0.000 1.000 N NA
 5420900 5420901 ATP_00201 ATP_00202 glnS   FALSE 0.023 381.000 0.000 1.000 N NA
 5420901 5420902 ATP_00202 ATP_R0001   16S_rRNA FALSE 0.033 694.000 0.000 NA   NA
 5420902 5420903 ATP_R0001 ATP_R0002 16S_rRNA tRNA-Ile TRUE 0.477 77.000 0.000 NA   NA
 5420903 5420904 ATP_R0002 ATP_R0003 tRNA-Ile 23S_rRNA TRUE 0.628 59.000 0.000 NA   NA
 5420904 5420905 ATP_R0003 ATP_R0004 23S_rRNA 5S_rRNA TRUE 0.955 3.000 0.000 NA   NA
 5420905 5420906 ATP_R0004 ATP_R0005 5S_rRNA tRNA-Val TRUE 0.928 16.000 0.000 NA   NA
 5420906 5420907 ATP_R0005 ATP_R0006 tRNA-Val tRNA-Thr TRUE 0.875 23.000 0.000 NA   NA
 5420907 5420908 ATP_R0006 ATP_R0007 tRNA-Thr tRNA-Lys TRUE 0.933 15.000 0.000 NA   NA
 5420908 5420909 ATP_R0007 ATP_R0008 tRNA-Lys tRNA-Leu TRUE 0.804 35.000 0.000 NA   NA
 5420909 5420910 ATP_R0008 ATP_R0009 tRNA-Leu tRNA-Ala TRUE 0.943 11.000 0.000 NA   NA
 5420910 5420911 ATP_R0009 ATP_R0010 tRNA-Ala tRNA-Met TRUE 0.688 52.000 0.000 NA   NA
 5420911 5420912 ATP_R0010 ATP_R0011 tRNA-Met tRNA-Met TRUE 0.949 6.000 0.000 NA   NA
 5420912 5420913 ATP_R0011 ATP_R0012 tRNA-Met tRNA-Ser TRUE 0.939 13.000 0.000 NA   NA
 5420913 5420914 ATP_R0012 ATP_R0013 tRNA-Ser tRNA-Met TRUE 0.579 65.000 0.000 NA   NA
 5420914 5420915 ATP_R0013 ATP_R0014 tRNA-Met tRNA-Asp TRUE 0.949 6.000 0.000 NA   NA
 5420915 5420916 ATP_R0014 ATP_R0015 tRNA-Asp tRNA-Phe TRUE 0.831 30.000 0.000 NA   NA
 5420916 5420917 ATP_R0015 ATP_00203 tRNA-Phe   FALSE 0.038 262.000 0.000 NA   NA
 5420917 5420918 ATP_00203 ATP_00204   hrcA TRUE 0.202 117.000 0.000 NA   NA
 5420918 5420919 ATP_00204 ATP_00205 hrcA grpE TRUE 0.993 30.000 0.025 1.000 N NA
 5420919 5420920 ATP_00205 ATP_00206 grpE dnaK TRUE 0.999 -16.000 0.019 0.012 Y NA
 5420920 5420921 ATP_00206 ATP_00207 dnaK dnaJ TRUE 0.976 108.000 0.196 0.005 Y NA
 5420921 5420922 ATP_00207 ATP_00208 dnaJ lplA TRUE 0.812 106.000 0.004 1.000 N NA
 5420924 5420925 ATP_00210 ATP_00211     TRUE 0.613 62.000 0.000 NA   NA
 5420925 5420926 ATP_00211 ATP_00212   spoU TRUE 0.316 64.000 0.000 1.000   NA
 5420926 5420927 ATP_00212 ATP_00213 spoU fliA1 FALSE 0.036 272.000 0.000 NA   NA
 5420927 5420928 ATP_00213 ATP_00214 fliA1 fliA2 TRUE 0.958 1.000 0.000 NA   NA
 5420928 5420929 ATP_00214 ATP_00215 fliA2   FALSE 0.038 257.000 0.000 NA   NA
 5420929 5420930 ATP_00215 ATP_00216     FALSE 0.038 262.000 0.000 NA   NA
 5420930 5420931 ATP_00216 ATP_00217     FALSE 0.054 203.000 0.000 NA   NA
 5420931 5420932 ATP_00217 ATP_00218   gepA1 TRUE 0.772 40.000 0.000 NA   NA
 5420932 5420933 ATP_00218 ATP_00219 gepA1   FALSE 0.037 972.000 0.000 NA   NA
 5420933 5420934 ATP_00219 ATP_00220     FALSE 0.042 231.000 0.000 NA   NA
 5420936 5420937 ATP_00222 ATP_00223   pth TRUE 0.576 57.000 0.000 1.000 N NA
 5420937 5420938 ATP_00223 ATP_00224 pth pduL TRUE 0.058 787.000 0.000 NA N NA
 5420938 5420939 ATP_00224 ATP_00225 pduL   TRUE 0.909 102.000 0.007 NA   NA
 5420939 5420940 ATP_00225 ATP_00226   ksgA TRUE 0.992 5.000 0.003 1.000   NA
 5420940 5420941 ATP_00226 ATP_00227 ksgA spoVG TRUE 0.731 110.000 0.002 1.000 N NA
 5420941 5420942 ATP_00227 ATP_00228 spoVG zntA TRUE 0.972 72.000 0.027 1.000 N NA
 5420942 5420943 ATP_00228 ATP_00229 zntA   TRUE 0.232 113.000 0.000 NA   NA
 5420943 5420944 ATP_00229 ATP_00230   ung TRUE 0.999 12.000 0.044 NA   NA
 5420944 5420945 ATP_00230 ATP_00231 ung dut TRUE 0.756 113.000 0.004 1.000 N NA
 5420945 5420946 ATP_00231 ATP_00232 dut rpsB FALSE 0.055 181.000 0.000 1.000 N NA
 5420946 5420947 ATP_00232 ATP_00233 rpsB tsf TRUE 0.996 58.000 0.748 1.000 Y NA
 5420947 5420948 ATP_00233 ATP_00234 tsf pyrH TRUE 0.974 92.000 0.416 1.000 N NA
 5420948 5420949 ATP_00234 ATP_00235 pyrH frr TRUE 0.999 3.000 0.626 NA N NA
 5420949 5420950 ATP_00235 ATP_00236 frr cdsA TRUE 0.974 58.000 0.004 NA N NA
 5420952 5420953 ATP_00238 ATP_00239 cca   TRUE 0.998 7.000 0.014 NA   NA
 5420954 5420955 ATP_00240 ATP_00241     TRUE 0.995 49.000 0.429 NA   NA
 5420955 5420956 ATP_00241 ATP_00242     TRUE 0.996 23.000 0.034 NA   NA
 5420956 5420957 ATP_00242 ATP_00243     TRUE 0.987 36.000 0.006 NA   NA
 5420957 5420958 ATP_00243 ATP_00244     TRUE 0.994 18.000 0.003 NA N NA
 5420958 5420959 ATP_00244 ATP_00245     TRUE 0.891 21.000 0.000 NA   NA
 5420959 5420960 ATP_00245 ATP_00246   greA TRUE 0.896 -10.000 0.000 1.000   NA
 5420960 5420961 ATP_00246 ATP_00247 greA   TRUE 0.512 43.000 0.000 0.084 N NA
 5420961 5420962 ATP_00247 ATP_00248   alaS TRUE 0.996 -3.000 0.003 1.000 N NA
 5420963 5420964 ATP_00249 ATP_00250     FALSE 0.031 572.000 0.000 NA   NA
 5420964 5420965 ATP_00250 ATP_00251     FALSE 0.043 2126.000 0.000 NA   NA
 5420965 5420966 ATP_00251 ATP_00252   ileS TRUE 0.990 48.000 0.004 1.000 Y NA
 5420966 5420967 ATP_00252 ATP_00253 ileS   TRUE 0.675 54.000 0.000 NA   NA
 5420967 5420968 ATP_00253 ATP_00254   holA TRUE 0.537 70.000 0.000 NA   NA
 5420969 5420970 ATP_00255 ATP_00256     TRUE 0.189 121.000 0.000 NA   NA
 5420970 5420971 ATP_00256 ATP_00257   gepA2 FALSE 0.051 212.000 0.000 NA   NA
 5420972 5420973 ATP_00258 ATP_00259     TRUE 0.104 155.000 0.000 NA   NA
 5420973 5420974 ATP_00259 ATP_00260     FALSE 0.031 422.000 0.000 NA   NA
 5420974 5420975 ATP_00260 ATP_00261     TRUE 0.765 42.000 0.000 NA   NA
 5420975 5420976 ATP_00261 ATP_00262     TRUE 0.964 -10.000 0.000 NA   NA
 5420976 5420977 ATP_00262 ATP_00263     FALSE 0.031 505.000 0.000 NA   NA
 5420977 5420978 ATP_00263 ATP_00264     TRUE 0.788 37.000 0.000 NA   NA
 5420978 5420979 ATP_00264 ATP_00265     FALSE 0.039 255.000 0.000 NA   NA
 5420979 5420980 ATP_00265 ATP_00266     TRUE 0.891 21.000 0.000 NA   NA
 5420982 5420983 ATP_00268 ATP_00269   rpsO TRUE 0.981 44.000 0.005 NA   NA
 5420983 5420984 ATP_00269 ATP_00270 rpsO hisS TRUE 0.099 372.000 0.000 1.000 Y NA
 5420984 5420985 ATP_00270 ATP_00271 hisS aspS TRUE 1.000 -3.000 0.161 0.070 Y NA
 5420985 5420986 ATP_00271 ATP_00272 aspS tilS TRUE 0.968 35.000 0.004 0.070 N NA
 5420986 5420987 ATP_00272 ATP_00273 tilS hflB TRUE 0.727 183.000 0.051 1.000 N NA
 5420987 5420988 ATP_00273 ATP_00274 hflB rluA TRUE 0.760 108.000 0.002 1.000 N NA
 5420988 5420989 ATP_00274 ATP_00275 rluA lig TRUE 0.618 52.000 0.000 1.000 N NA
 5420989 5420990 ATP_00275 ATP_00276 lig   FALSE 0.031 375.000 0.000 NA   NA
 5420990 5420991 ATP_00276 ATP_R0031   tRNA-Thr TRUE 0.179 122.000 0.000 NA   NA
 5420991 5420992 ATP_R0031 ATP_R0032 tRNA-Thr tRNA-Gly TRUE 0.649 57.000 0.000 NA   NA
 5420993 5420994 ATP_R0033 ATP_00277 tRNA-Leu   FALSE 0.040 1090.000 0.000 NA   NA
 5420995 5420996 ATP_00278 ATP_00279 rpmB   TRUE 0.836 74.000 0.002 1.000   NA
 5420997 5420998 ATP_00280 ATP_00281     TRUE 0.843 29.000 0.000 NA   NA
 5420998 5420999 ATP_00281 ATP_00282   rpmA TRUE 0.982 66.000 0.335 1.000   NA
 5420999 5421000 ATP_00282 ATP_00283 rpmA   TRUE 0.999 26.000 0.203 NA Y NA
 5421000 5421001 ATP_00283 ATP_00284   rplU TRUE 1.000 14.000 0.208 NA Y NA
 5421001 5421002 ATP_00284 ATP_00285 rplU   TRUE 0.987 30.000 0.004 NA   NA
 5421002 5421003 ATP_00285 ATP_00286     TRUE 0.065 185.000 0.000 NA   NA
 5421003 5421004 ATP_00286 ATP_00287     TRUE 0.943 11.000 0.000 NA   NA
 5421004 5421005 ATP_00287 ATP_00288   hcaD TRUE 0.369 95.000 0.000 NA   NA
 5421006 5421007 ATP_00289 ATP_00290 lepA potA FALSE 0.031 232.000 0.000 1.000 N NA
 5421007 5421008 ATP_00290 ATP_00291 potA potB TRUE 0.999 0.000 0.928 0.031 Y NA
 5421008 5421009 ATP_00291 ATP_00292 potB potC TRUE 0.999 22.000 0.492 0.031 Y NA
 5421009 5421010 ATP_00292 ATP_00293 potC potD TRUE 0.999 -3.000 0.017 0.031 Y NA
 5421011 5421012 ATP_R0039 ATP_00294 tRNA-Ser acpS TRUE 0.096 160.000 0.000 NA   NA
 5421013 5421014 ATP_00295 ATP_00296 cspJ metK TRUE 0.118 127.000 0.000 1.000 N NA
 5421014 5421015 ATP_00296 ATP_00297 metK tig FALSE 0.038 207.000 0.000 1.000 N NA
 5421015 5421016 ATP_00297 ATP_00298 tig lonA TRUE 0.991 89.000 0.161 1.000 Y NA
 5421016 5421017 ATP_00298 ATP_00299 lonA   TRUE 0.406 88.000 0.000 NA   NA
 5421017 5421018 ATP_00299 ATP_00300   rpsU TRUE 0.165 125.000 0.000 NA   NA
 5421018 5421019 ATP_00300 ATP_00301 rpsU   TRUE 0.532 164.000 0.003 NA   NA
 5421019 5421020 ATP_00301 ATP_00302   era TRUE 0.998 17.000 0.026 NA   NA
 5421020 5421021 ATP_00302 ATP_00303 era recO TRUE 0.999 0.000 0.108 1.000   NA
 5421021 5421022 ATP_00303 ATP_00304 recO glyQS TRUE 0.985 55.000 0.034 1.000 N NA
 5421022 5421023 ATP_00304 ATP_00305 glyQS dnaG1 TRUE 0.996 16.000 0.010 1.000 N NA
 5421023 5421024 ATP_00305 ATP_00306 dnaG1 rpoD TRUE 0.995 38.000 0.114 1.000 N NA
 5421024 5421025 ATP_00306 ATP_00307 rpoD   TRUE 0.636 845.000 0.053 NA   NA
 5421025 5421026 ATP_00307 ATP_R0029   tRNA-Arg TRUE 0.255 112.000 0.000 NA   NA
 5421026 5421027 ATP_R0029 ATP_00308 tRNA-Arg rpmF TRUE 0.132 135.000 0.000 NA   NA
 5421027 5421028 ATP_00308 ATP_00309 rpmF   TRUE 0.232 113.000 0.000 NA   NA
 5421028 5421029 ATP_00309 ATP_00310   rpsD FALSE 0.045 221.000 0.000 NA   NA
 5421029 5421030 ATP_00310 ATP_00311 rpsD   FALSE 0.045 189.000 0.000 1.000 N NA
 5421030 5421031 ATP_00311 ATP_00312     TRUE 0.977 66.000 1.000 NA   NA
 5421031 5421032 ATP_00312 ATP_00313   nusA FALSE 0.031 373.000 0.000 NA   NA
 5421032 5421033 ATP_00313 ATP_00314 nusA   TRUE 0.999 43.000 0.323 NA Y NA
 5421033 5421034 ATP_00314 ATP_00315   infB TRUE 0.999 4.000 0.171 NA N NA
 5421034 5421035 ATP_00315 ATP_00316 infB rbfA TRUE 1.000 6.000 0.530 1.000 Y NA
 5421035 5421036 ATP_00316 ATP_00317 rbfA priA TRUE 0.418 76.000 0.000 1.000 N NA
 5421036 5421037 ATP_00317 ATP_00318 priA   TRUE 0.144 98.000 0.000 1.000   NA
 5421037 5421038 ATP_00318 ATP_00319   ackA TRUE 0.981 62.000 0.081 1.000   NA
 5421038 5421039 ATP_00319 ATP_R0038 ackA tRNA-Ser FALSE 0.033 343.000 0.000 NA   NA
 5421039 5421040 ATP_R0038 ATP_00320 tRNA-Ser thyA FALSE 0.040 243.000 0.000 NA   NA
 5421040 5421041 ATP_00320 ATP_00321 thyA folA TRUE 0.999 -3.000 0.295 1.000 N NA
 5421041 5421042 ATP_00321 ATP_00322 folA plsC TRUE 0.988 45.000 0.022 1.000 N NA
 5421042 5421043 ATP_00322 ATP_00323 plsC tldD TRUE 0.579 65.000 0.000 NA   NA
 5421043 5421044 ATP_00323 ATP_00324 tldD pmbA TRUE 0.999 6.000 0.114 NA   NA
 5421044 5421045 ATP_00324 ATP_00325 pmbA trxA TRUE 0.593 64.000 0.000 NA   NA
 5421045 5421046 ATP_00325 ATP_00326 trxA truB TRUE 0.977 51.000 0.007 1.000 N NA
 5421046 5421047 ATP_00326 ATP_00327 truB   TRUE 0.505 75.000 0.000 NA   NA
 5421048 5421049 ATP_00328 ATP_00329 smpB ppa TRUE 0.352 185.000 0.002 1.000 N NA
 5421049 5421050 ATP_00329 ATP_00330 ppa   TRUE 0.472 100.000 0.000 NA N NA
 5421050 5421051 ATP_00330 ATP_00331   mscL TRUE 0.238 127.000 0.000 NA N NA
 5421052 5421053 ATP_00332 ATP_00333 rplM rpsI TRUE 0.999 11.000 0.601 0.077 Y NA
 5421053 5421054 ATP_00333 ATP_00334 rpsI gltX TRUE 0.980 75.000 0.006 1.000 Y NA
 5421054 5421055 ATP_00334 ATP_00335 gltX cysS TRUE 0.990 64.000 0.013 1.000 Y NA
 5421055 5421056 ATP_00335 ATP_00336 cysS   TRUE 0.638 58.000 0.000 NA   NA
 5421056 5421057 ATP_00336 ATP_00337     TRUE 0.702 51.000 0.000 NA   NA
 5421057 5421058 ATP_00337 ATP_00338   valS FALSE 0.032 588.000 0.000 NA   NA
 5421058 5421059 ATP_00338 ATP_00339 valS pldB TRUE 0.860 38.000 0.000 NA N NA
 5421059 5421060 ATP_00339 ATP_00340 pldB rpsJ TRUE 0.072 230.000 0.000 NA N NA
 5421060 5421061 ATP_00340 ATP_00341 rpsJ rplC TRUE 0.998 51.000 0.467 1.000 Y NA
 5421061 5421062 ATP_00341 ATP_00342 rplC rplD TRUE 1.000 -7.000 0.544 0.077 Y NA
 5421062 5421063 ATP_00342 ATP_00343 rplD rplW TRUE 1.000 0.000 0.307 1.000 Y NA
 5421063 5421064 ATP_00343 ATP_00344 rplW rplB TRUE 0.990 76.000 0.849 1.000 Y NA
 5421064 5421065 ATP_00344 ATP_00345 rplB rpsS TRUE 0.999 16.000 0.820 1.000 Y NA
 5421065 5421066 ATP_00345 ATP_00346 rpsS rplV TRUE 0.999 18.000 0.769 1.000 Y NA
 5421066 5421067 ATP_00346 ATP_00347 rplV rpsC TRUE 1.000 -16.000 0.719 1.000 Y NA
 5421067 5421068 ATP_00347 ATP_00348 rpsC rplP TRUE 1.000 3.000 0.828 1.000 Y NA
 5421068 5421069 ATP_00348 ATP_00349 rplP rpmC TRUE 1.000 0.000 0.802 0.077 Y NA
 5421069 5421070 ATP_00349 ATP_00350 rpmC rpsQ TRUE 0.992 60.000 0.828 0.077 Y NA
 5421070 5421071 ATP_00350 ATP_00351 rpsQ rplN TRUE 1.000 -3.000 0.791 1.000 Y NA
 5421071 5421072 ATP_00351 ATP_00352 rplN rplX TRUE 0.999 18.000 0.810 1.000 Y NA
 5421072 5421073 ATP_00352 ATP_00353 rplX rplE TRUE 0.999 17.000 0.758 0.077 Y NA
 5421073 5421074 ATP_00353 ATP_00354 rplE rpsN TRUE 0.999 15.000 0.309 0.077 Y NA
 5421074 5421075 ATP_00354 ATP_00355 rpsN rpsH TRUE 0.999 25.000 0.295 0.077 Y NA
 5421075 5421076 ATP_00355 ATP_00356 rpsH rplF TRUE 0.999 17.000 0.808 0.077 Y NA
 5421076 5421077 ATP_00356 ATP_00357 rplF rplR TRUE 0.998 22.000 0.815 0.077 Y NA
 5421077 5421078 ATP_00357 ATP_00358 rplR rpsE TRUE 0.999 12.000 0.814 1.000 Y NA
 5421078 5421079 ATP_00358 ATP_00359 rpsE rpmD TRUE 1.000 7.000 0.789 1.000 Y NA
 5421079 5421080 ATP_00359 ATP_00360 rpmD rplO TRUE 0.999 16.000 0.653 0.015 Y NA
 5421080 5421081 ATP_00360 ATP_00361 rplO secY TRUE 0.999 4.000 0.730 1.000 N NA
 5421081 5421082 ATP_00361 ATP_00362 secY map TRUE 0.991 51.000 0.087 1.000 N NA
 5421082 5421083 ATP_00362 ATP_00363 map infA TRUE 0.999 30.000 0.160 1.000 Y NA
 5421083 5421084 ATP_00363 ATP_00364 infA rpmJ TRUE 0.991 38.000 0.078 1.000   NA
 5421084 5421085 ATP_00364 ATP_00365 rpmJ rpsM TRUE 0.995 18.000 0.067 0.077   NA
 5421085 5421086 ATP_00365 ATP_00366 rpsM rpsK TRUE 0.999 14.000 0.810 0.077 Y NA
 5421086 5421087 ATP_00366 ATP_00367 rpsK rpoA TRUE 0.999 15.000 0.308 1.000 N NA
 5421087 5421088 ATP_00367 ATP_00368 rpoA rplQ TRUE 0.997 7.000 0.010 1.000 N NA
 5421088 5421089 ATP_00368 ATP_00369 rplQ cbiO2 FALSE 0.025 305.000 0.000 1.000 N NA
 5421089 5421090 ATP_00369 ATP_00370 cbiO2 cbiO TRUE 1.000 -24.000 0.713 0.026 Y NA
 5421090 5421091 ATP_00370 ATP_00371 cbiO cbiQ TRUE 0.999 24.000 0.095 1.000 Y NA
 5421091 5421092 ATP_00371 ATP_00372 cbiQ truA TRUE 0.996 26.000 0.076 1.000 N NA
 5421092 5421093 ATP_00372 ATP_00373 truA tmk TRUE 0.992 21.000 0.006 1.000 N NA
 5421093 5421094 ATP_00373 ATP_00374 tmk holB TRUE 0.999 0.000 0.254 1.000 N NA
 5421094 5421095 ATP_00374 ATP_00375 holB tpm TRUE 0.987 31.000 0.016 1.000   NA
 5421095 5421096 ATP_00375 ATP_00376 tpm metG TRUE 0.997 4.000 0.018 1.000   NA
 5421096 5421097 ATP_00376 ATP_00377 metG pgi FALSE 0.030 234.000 0.000 1.000 N NA
 5421097 5421098 ATP_00377 ATP_00378 pgi rpmH FALSE 0.011 315.000 0.000 1.000   NA
 5421098 5421099 ATP_00378 ATP_00379 rpmH rnpA TRUE 0.921 110.000 0.787 1.000   NA
 5421099 5421100 ATP_00379 ATP_00380 rnpA yidC TRUE 0.994 24.000 0.021 1.000 N NA
 5421100 5421101 ATP_00380 ATP_R0016 yidC tRNA-Tyr TRUE 0.126 140.000 0.000 NA   NA
 5421101 5421102 ATP_R0016 ATP_R0017 tRNA-Tyr 16S_rRNA TRUE 0.132 135.000 0.000 NA   NA
 5421102 5421103 ATP_R0017 ATP_R0018 16S_rRNA tRNA-Ile TRUE 0.477 77.000 0.000 NA   NA
 5421103 5421104 ATP_R0018 ATP_R0019 tRNA-Ile 23S_rRNA TRUE 0.628 59.000 0.000 NA   NA
 5421104 5421105 ATP_R0019 ATP_R0020 23S_rRNA 5S_rRNA TRUE 0.952 4.000 0.000 NA   NA
 5421105 5421106 ATP_R0020 ATP_R0021 5S_rRNA tRNA-Val TRUE 0.928 16.000 0.000 NA   NA
 5421106 5421107 ATP_R0021 ATP_R0022 tRNA-Val tRNA-Asn TRUE 0.875 23.000 0.000 NA   NA
 5421107 5421108 ATP_R0022 ATP_00381 tRNA-Asn pnp TRUE 0.179 122.000 0.000 NA   NA
 5421108 5421109 ATP_00381 ATP_R0023 pnp rnpL TRUE 0.715 50.000 0.000 NA   NA
 5421109 5421110 ATP_R0023 ATP_00382 rnpL hflB TRUE 0.804 35.000 0.000 NA   NA
 5421110 5421111 ATP_00382 ATP_00383 hflB rpmG TRUE 0.216 110.000 0.000 1.000 N NA
 5421111 5421112 ATP_00383 ATP_00384 rpmG secE TRUE 0.991 39.000 0.080 1.000   NA
 5421112 5421113 ATP_00384 ATP_00385 secE nusG TRUE 0.998 -3.000 0.843 1.000   NA
 5421113 5421114 ATP_00385 ATP_00386 nusG rplK TRUE 0.979 77.000 0.681 1.000 N NA
 5421114 5421115 ATP_00386 ATP_00387 rplK rplA TRUE 0.995 57.000 0.838 1.000 Y NA
 5421115 5421116 ATP_00387 ATP_00388 rplA rplJ TRUE 0.948 162.000 0.302 1.000 Y NA
 5421116 5421117 ATP_00388 ATP_00389 rplJ rplL TRUE 0.999 17.000 0.884 1.000 Y NA
 5421117 5421118 ATP_00389 ATP_00390 rplL rpoB TRUE 0.781 191.000 0.223 1.000 N NA
 5421118 5421119 ATP_00390 ATP_00391 rpoB rpoC TRUE 0.999 0.000 0.851 0.006 Y NA
 5421119 5421120 ATP_00391 ATP_00392 rpoC rpsL TRUE 0.668 194.000 0.035 1.000 N NA
 5421120 5421121 ATP_00392 ATP_00393 rpsL rpsG TRUE 0.996 52.000 0.224 0.017 Y NA
 5421121 5421122 ATP_00393 ATP_00394 rpsG fusA TRUE 0.998 36.000 0.579 1.000 Y NA
 5421122 5421123 ATP_00394 ATP_00395 fusA tuf TRUE 0.993 66.000 0.400 0.004 Y NA
 5421125 5421126 ATP_00397 ATP_00398 fliA3 ssb FALSE 0.026 174.000 0.000 1.000   NA
 5421126 5421127 ATP_00398 ATP_00399 ssb   TRUE 0.831 30.000 0.000 NA   NA
 5421127 5421128 ATP_00399 ATP_00400     FALSE 0.032 604.000 0.000 NA   NA
 5421128 5421129 ATP_00400 ATP_00401     TRUE 0.949 6.000 0.000 NA   NA
 5421129 5421130 ATP_00401 ATP_00402     TRUE 0.854 26.000 0.000 NA   NA
 5421130 5421131 ATP_00402 ATP_00403   tmk TRUE 0.989 12.000 0.002 1.000   NA
 5421131 5421132 ATP_00403 ATP_00404 tmk   FALSE 0.032 358.000 0.000 NA   NA
 5421132 5421133 ATP_00404 ATP_00405     TRUE 0.147 128.000 0.000 NA   NA
 5421133 5421134 ATP_00405 ATP_00406   hflB TRUE 0.423 83.000 0.000 NA   NA
 5421134 5421135 ATP_00406 ATP_00407 hflB   FALSE 0.036 835.000 0.000 NA   NA
 5421135 5421136 ATP_00407 ATP_00408     TRUE 0.811 34.000 0.000 NA   NA
 5421136 5421137 ATP_00408 ATP_00409     TRUE 0.702 51.000 0.000 NA   NA
 5421137 5421138 ATP_00409 ATP_00410     TRUE 0.811 34.000 0.000 NA   NA
 5421138 5421139 ATP_00410 ATP_00411   gepA3 TRUE 0.937 14.000 0.000 NA   NA
 5421139 5421140 ATP_00411 ATP_00412 gepA3   FALSE 0.030 479.000 0.000 NA   NA
 5421140 5421141 ATP_00412 ATP_00413     TRUE 0.195 120.000 0.000 NA   NA
 5421141 5421142 ATP_00413 ATP_00414     TRUE 0.132 135.000 0.000 NA   NA
 5421142 5421143 ATP_00414 ATP_00415   dnaG2 TRUE 0.458 78.000 0.000 NA   NA
 5421143 5421144 ATP_00415 ATP_00416 dnaG2   TRUE 0.675 54.000 0.000 NA   NA
 5421144 5421145 ATP_00416 ATP_00417     TRUE 0.232 113.000 0.000 NA   NA
 5421145 5421146 ATP_00417 ATP_00418     TRUE 0.458 78.000 0.000 NA   NA
 5421146 5421147 ATP_00418 ATP_00419     TRUE 0.360 96.000 0.000 NA   NA
 5421147 5421148 ATP_00419 ATP_00420     TRUE 0.820 31.000 0.000 NA   NA
 5421148 5421149 ATP_00420 ATP_00421     FALSE 0.049 215.000 0.000 NA   NA
 5421149 5421150 ATP_00421 ATP_00422   polC2 FALSE 0.039 1029.000 0.000 NA   NA
 5421150 5421151 ATP_00422 ATP_00423 polC2   TRUE 0.960 17.000 0.000 0.073 Y NA
 5421151 5421152 ATP_00423 ATP_00424     FALSE 0.033 635.000 0.000 NA   NA
 5421152 5421153 ATP_00424 ATP_00425     FALSE 0.031 378.000 0.000 NA   NA
 5421153 5421154 ATP_00425 ATP_00426     FALSE 0.031 394.000 0.000 NA   NA
 5421154 5421155 ATP_00426 ATP_00427     TRUE 0.962 81.000 1.000 NA   NA
 5421155 5421156 ATP_00427 ATP_00428     FALSE 0.034 735.000 0.000 NA   NA
 5421156 5421157 ATP_00428 ATP_00429     TRUE 0.423 83.000 0.000 NA   NA
 5421157 5421158 ATP_00429 ATP_00430     FALSE 0.035 805.000 0.000 NA   NA
 5421158 5421159 ATP_00430 ATP_00431   pepA FALSE 0.031 571.000 0.000 NA   NA
 5421159 5421160 ATP_00431 ATP_00432 pepA   FALSE 0.037 980.000 0.000 NA   NA
 5421160 5421161 ATP_00432 ATP_00433     TRUE 0.143 130.000 0.000 NA   NA
 5421163 5421164 ATP_00435 ATP_00436 proS argS TRUE 0.615 80.000 0.000 0.061 Y NA
 5421164 5421165 ATP_00436 ATP_R0024 argS tRNA-Glu FALSE 0.040 242.000 0.000 NA   NA
 5421165 5421166 ATP_R0024 ATP_R0025 tRNA-Glu tRNA-Arg TRUE 0.883 22.000 0.000 NA   NA
 5421166 5421167 ATP_R0025 ATP_R0026 tRNA-Arg tRNA-Pro TRUE 0.715 50.000 0.000 NA   NA
 5421167 5421168 ATP_R0026 ATP_R0027 tRNA-Pro tRNA-Gly TRUE 0.899 20.000 0.000 NA   NA
 5421168 5421169 ATP_R0027 ATP_00437 tRNA-Gly rpsP FALSE 0.057 193.000 0.000 NA   NA
 5421169 5421170 ATP_00437 ATP_00438 rpsP rimM TRUE 0.993 69.000 0.342 0.071 Y NA
 5421170 5421171 ATP_00438 ATP_00439 rimM trmD TRUE 1.000 -3.000 0.672 1.000 Y NA
 5421171 5421172 ATP_00439 ATP_00440 trmD rplS TRUE 1.000 2.000 0.567 1.000 Y NA
 5421172 5421173 ATP_00440 ATP_00441 rplS infC TRUE 0.097 419.000 0.000 1.000 Y NA
 5421173 5421174 ATP_00441 ATP_00442 infC rpmI TRUE 0.999 18.000 0.652 1.000 Y NA
 5421174 5421175 ATP_00442 ATP_00443 rpmI rplT TRUE 0.996 15.000 0.002 0.071 Y NA
 5421175 5421176 ATP_00443 ATP_00444 rplT   TRUE 0.579 65.000 0.000 NA   NA
 5421176 5421177 ATP_00444 ATP_00445   acpP FALSE 0.038 1006.000 0.000 NA   NA
 5421177 5421178 ATP_00445 ATP_00446 acpP leuS TRUE 0.985 25.000 0.004 1.000 N NA
 5421178 5421179 ATP_00446 ATP_00447 leuS gmk TRUE 0.937 65.000 0.004 1.000 N NA
 5421179 5421180 ATP_00447 ATP_00448 gmk rpoZ TRUE 0.999 -3.000 0.471 1.000   NA
 5421180 5421181 ATP_00448 ATP_00449 rpoZ mraW TRUE 0.971 36.000 0.004 1.000   NA
 5421181 5421182 ATP_00449 ATP_00450 mraW sfcA TRUE 0.668 47.000 0.000 1.000 N NA
 5421182 5421183 ATP_00450 ATP_00451 sfcA   FALSE 0.030 429.000 0.000 NA   NA
 5421183 5421184 ATP_00451 ATP_00452     FALSE 0.031 569.000 0.000 NA   NA
 5421184 5421185 ATP_00452 ATP_00453     TRUE 0.768 41.000 0.000 NA   NA
 5421185 5421186 ATP_00453 ATP_00454   hflB FALSE 0.044 227.000 0.000 NA   NA
 5421186 5421187 ATP_00454 ATP_00455 hflB   FALSE 0.035 273.000 0.000 NA   NA
 5421187 5421188 ATP_00455 ATP_00456     FALSE 0.010 469.000 0.000 1.000   NA
 5421188 5421189 ATP_00456 ATP_00457   hflB FALSE 0.031 561.000 0.000 NA   NA
 5421193 5421194 ATP_00461 ATP_00462     FALSE 0.042 1715.000 0.000 NA   NA
 5421194 5421195 ATP_00462 ATP_00463   oppA FALSE 0.030 424.000 0.000 NA   NA
 5421195 5421196 ATP_00463 ATP_00464 oppA hflB TRUE 0.704 22.000 0.000 1.000   NA
 5421200 5421201 ATP_00468 ATP_00469 sodA nusB TRUE 0.985 51.000 0.055 1.000   NA
 5421201 5421202 ATP_00469 ATP_00470 nusB srmB TRUE 0.098 112.000 0.000 1.000   NA
 5421202 5421203 ATP_00470 ATP_00471 srmB nfo TRUE 1.000 -7.000 0.104 1.000 Y NA
 5421203 5421204 ATP_00471 ATP_00472 nfo   FALSE 0.020 181.000 0.000 0.069 N NA
 5421204 5421205 ATP_00472 ATP_00473     FALSE 0.031 534.000 0.000 NA   NA
 5421205 5421206 ATP_00473 ATP_00474     TRUE 0.121 148.000 0.000 NA   NA
 5421206 5421207 ATP_00474 ATP_00475     FALSE 0.036 272.000 0.000 NA   NA
 5421207 5421208 ATP_00475 ATP_00476     FALSE 0.031 422.000 0.000 NA   NA
 5421208 5421209 ATP_00476 ATP_00477     TRUE 0.213 116.000 0.000 NA   NA
 5421209 5421210 ATP_00477 ATP_00478     FALSE 0.032 622.000 0.000 NA   NA
 5421210 5421211 ATP_00478 ATP_00479   mleP FALSE 0.030 440.000 0.000 NA   NA
 5421211 5421212 ATP_00479 ATP_00480 mleP   FALSE 0.034 742.000 0.000 NA   NA
 5421212 5421213 ATP_00480 ATP_00481     FALSE 0.036 272.000 0.000 NA   NA
 5421213 5421214 ATP_00481 ATP_00482     FALSE 0.032 370.000 0.000 NA   NA
 5421214 5421215 ATP_00482 ATP_00483     TRUE 0.333 101.000 0.000 NA   NA
 5421215 5421216 ATP_00483 ATP_00484     FALSE 0.034 295.000 0.000 NA   NA
 5421216 5421217 ATP_00484 ATP_00485   phnL FALSE 0.030 484.000 0.000 NA   NA
 5421219 5421220 ATP_00487 ATP_00488 hflB   FALSE 0.046 220.000 0.000 NA   NA
 5421220 5421221 ATP_00488 ATP_00489     FALSE 0.030 492.000 0.000 NA   NA
 5421221 5421222 ATP_00489 ATP_00490     FALSE 0.038 1028.000 0.000 NA   NA
 5421222 5421223 ATP_00490 ATP_00491     TRUE 0.312 105.000 0.000 NA   NA
 5421223 5421224 ATP_00491 ATP_00492   znuA FALSE 0.041 1593.000 0.000 NA   NA
 5421224 5421225 ATP_00492 ATP_00493 znuA znuC TRUE 0.994 55.000 0.898 1.000 Y NA
 5421225 5421226 ATP_00493 ATP_00494 znuC znuB TRUE 1.000 2.000 0.432 1.000 Y NA
 5421226 5421227 ATP_00494 ATP_00495 znuB znuB TRUE 0.999 7.000 0.443 0.011 Y NA
 5421227 5421228 ATP_00495 ATP_00496 znuB   TRUE 0.082 173.000 0.000 NA   NA